Page 19 - Winter2020
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In the case of the novel coronavirus, every  discussed. This is the equivalent of isolating   Instead of
            single published photograph we have seen show-  caffeine from coffee.              working with
            ing the “isolated” virus shows no such thing.   Instead of working with pure virus, how-
            Instead, it shows tissue with a number of dots,  ever, researchers commonly continue to use  pure virus,
            usually with an arrow pointing to the so-called  the supernatant, which contains all kinds of   however,
            coronavirus. If you see tissue in the photograph,  molecules and particles. In other words, in-  researchers
            by definition it’s not isolated. An example of  stead of doing a genetic analysis of the isolated
            such a photograph comes from “Virus Isola-  virus, they do genetic analysis on the mess of  commonly
            tion from the First Patient with SARS-CoV-2  compounds in the supernatant.         continue to
            in Korea,” published February 24, 2020 in the   Now, to get enough “virus” to use ex-  use the
            Journal of Korean Medical Science (Figure 1,  perimentally, virologists must grow it in a
            previous page).  Although the authors claimed  biological medium such as an animal (or at  supernatant,
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            to have isolated the virus, the photographs  least cells from an animal). Unlike bacteria,   which
            they published show “virus” structures inside  which can be grown in Petri dishes, viruses   contains all
            and outside a cell (indicated by arrows); they  are not alive and can only “grow” in other liv-
            do not show isolated virus. In comparison,  ing cells. However, virologists do not transfer  kinds of
            you can see a properly isolated “virus” in the  the supernatant to healthy tissue, but to tissue   molecules
            electron microscopy image of the chickenpox  that has been poisoned with strong antibiotics   and particles.
            “virus” shown in Figure 2, below. (By the way,  and starved of nutrients (using what’s called a
            although health officials claim that chickenpox  “minimum-nutrient medium”). They do this
            is “highly contagious,” no studies have shown  to make sure that what is left is only viruses
            that exposing people to isolated chickenpox  and not bacteria. Moreover, the main type of
            virus makes them sick.)                   tissue used is kidney cells from various species
                                                      (often monkey kidney cells called Vero cells)
            MORE ON THE SUPERNATANT                   or lung cancer cells. When researchers do this,
               Today’s virologists use the supernatant—  the “viruses” seem to multiply, allowing them
            the liquid obtained after filtration or sometimes  to sell the resultant mess of “viruses,” particles,
            centrifugation—processes that remove bacteria,  poisons, dead tissue and cellular debris—called
            fungi and other larger material. This is what  “cultured” virus—to other researchers as
            they refer to as “purification.” However, this  samples of “purified” or “isolated” virus for
            is like filtering the grounds out of coffee to get  use in studies.
            caffeine; your aim may be to study caffeine’s   By the way, the CDC has published guide-
            effects, but there are hundreds or thousands of  lines on “transport medium” for viruses.  Trans-
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            other compounds in the coffee, so you will still  port medium is what they use to inoculate the
            need to isolate the caffeine.             starved tissue, which then grows the “virus.”
               What virus researchers ought to do after  The three main ingredients (“reagents”) are
            obtaining the supernatant is to put it in a “su-  fetal bovine serum (extracted from still-living
            crose density centrifuge column,” which spins  fetal calves and preserved with antifungals,
            out the various compounds into bands. One of  among other poisons) along with two highly
            these bands will contain the pure virus, which  toxic antibiotics, amphotericin (affectionately
            can then be photographed and analyzed as  called “ampho-terrible”) and gentamicin. This


                                           FIGURE 2. Properly isolated chickenpox “virus”












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